custom.aln()

Description

Downloads orthologous sequences and carries out their alignment.

Usage

custom.aln(target, species, molecule = 'protein', sfile = FALSE)

Arguments

target the KEGG identifier of the protein of interest.

species a character vector containing the KEGG code for the species of interest.

molecule a character string specifying the nature of the sequence; it must be one of ‘dna’, ‘protein’.

sfile logical, if TRUE a fasta file with the alignment is saved in the current directory.

Value

Returns a list of class “fasta” with three components: ‘ali’ (an alignment character matrix with a row per sequence and a column per residue), ‘id’ (sequence identifiers) and ‘call’ (the matched call).

References

Edgar RC. Nucleic Acids Res. 2004 32:1792-1797.
Edgar RC. BMC Bioinformatics 5(1):113.

See Also

msa(), list.hom(), parse.hssp(), get.hssp(), shannon(), site.type()

Details

Multiple sequence alignment (MSA) is generally the alignment of three or more biological sequences. From the output, homology can be inferred and the evolutionary relationships between the sequences studied. Thus, alignment is the most important stage in most evolutionary analyses. In addition, MSA is also an essential tool for protein structure and function prediction. The package ptm offers several functions that will assist you in the process of sequence analysis:

msa
custom.aln (current doc)
list.hom
parse.hssp
get.hssp
shannon
site.type

The function custom.aln() carries out MSAs implementing the program MUSCLE, which you must have intalled in your machine previously. MUSCLE is a fast multiple sequence alignment program available from the muscle home page. Details to guide you through the installation of MUSCLE can be found here.

In addition to call MUSCLE to perform the alignment, custom.aln() will also serch for and download the requested orthologous sequences for you. So, you just have to worry about prividing a list with the species you are interested in. For instance, suppose we have been examining the following structure, which corresponds to the methionyl-tRNA synthetase of Escherichia coli.

If, as a first approach, we wish to have an impression of which regions of this protein are most conserved and which have diverged the most throughout evolutionary time, we can carry out an alignment of our target protein with the sequences from sets of pre-established species.

To achieve this, the only data we have at hand is the PDB ID of the above structure: 1PFV. Enough!

custom.aln(target = id.mapping(id = '1pfv', from = 'pdb', to = 'kegg'), species = 'vertebrates')
##       1        .         .         .         .         .         .         70 
## ref   ----------------------------------------------------------------------
## dre   MKLFIGEGNPHCLKVLAALELSGVRCE--TQLVKHEEKVVPYLTHPVLPILQLPSGQHLFSPNSICQYLF
## xtr   MKLFVGEGNPHGVKVLAAAALWAEHVH--INRLQQEEKIVPFMSQPRLPALDLENGNYLFLSNAVCRYFY
## bta   MRLFVSEGAPGSLPVLAAAGRAQGRAELLISTVGPEECVVPFLTRPKVPVLQLDSGNYLFSTSAICRYFF
## ptr   MRLFVSEGVPGCLPVLAAAGRARGRAEVLISTVGPEDCVVPFLTRPKVPVLQLDSGNYLFSTSAICRYFF
## ggo   MRLFVSEGVPGCLPVLAAAGRARGRAEVLISTVGPEDCVVPFLTRPKVPVLQLDSGNYLFSTSAICRYFF
## hsa   MRLFVSDGVPGCLPVLAAAGRARGRAEVLISTVGPEDCVVPFLTRPKVPVLQLDSGNYLFSTSAICRYFF
## rno   MRLFVSEGSPGSLPVLAAAARARGRAELLISTVGPEECVVPFLTRPKVPVLQLDSGNYLFSASAICRYFF
## gga   MRLRVAAGSPAALKVVAAAHCAGAPVQ--LCWAEPGEPPPSPLCPPWAPALQLESGAVLFSPNAICQYFF
##                                                                              
##       1        .         .         .         .         .         .         70 
## 
##      71        .         .         .         .         .         .         140 
## ref   ----------------------------------------------------------------------
## dre   DVSGQKATDATNQWLEWEATNLQPAVLQSLQLVALQGKR-VEAAAVMKEPLSWLEQSLSKRKTSFLTDEV
## xtr   LSSGHDVCNLSNQWLEWEAVELQPAFSAALYAHVVQGRKKEEVIASLSASLSHLDQSLAGKPSPYLVKDA
## bta   LLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGPVRRALTHIDHSLSRRSCPFLAGET
## ptr   LLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRALTHIDHSLSRQNCPFLAGET
## ggo   LLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRALTHIDHSLSRQNCPFLAGET
## hsa   LLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRALTHIDHSLSRQNCPFLAGET
## rno   LLCGWEQDDLTNQWLEWEATELQPVLSAALYCLVVQGKKGEDVLGPLRRVLTHIDHSLSRQNCPFLAGDT
## gga   LRRGEQPTDLTTQWLEWEATELQPAALAALYAHLVHGRTGVEALGE---PLGHIERSLVGRGTAYLAGDT
##                                                                              
##      71        .         .         .         .         .         .         140 
## 
##     141        .         .         .         .         .         .         210 
## ref   ----------------------------------------------------------------------
## dre   VSVADVVLWAALYPLLSDSAFEPGDLQAVRGWFERVCSVSACQSAALRVLQGKGAEALKSFLQKQPVTHT
## xtr   LTVADIVVWGSLYPLIEDASSLPEEMKLLKHWFQTVSQLEQCQKAVSFLMKDGGSSVFKPYLQKQPVPI-
## bta   ESLADIVLWGALYPLLQDPSYLPEELGALHSWFQTLSSQEPCQRAAETVLKQQGVLALRPYLQKQPQPS-
## ptr   ESLADIVLWGALYPLLQDPAYLPEELSALHSWFQTLSTQEPCQRAAETVLKQQGVLALRPYLQKQPQPS-
## ggo   ESLADIVLWGALYPLLQDPAYLPEELSALHSWFQTLSTQEPCQRAAETVLKQQGVLALRPYLQKQPQPS-
## hsa   ESLADIVLWGALYPLLQDPAYLPEELSALHSWFQTLSTQEPCQRAAETVLKQQGVLALRPYLQKQPQPS-
## rno   ESLADIVLWGALYPLLQDPAYLPEELGALQSWFQTLSTQEPCQRAAETVLKQQGVLALRPYLQKQPQPQP
## gga   ESVADVVVWSTLFPVLRDEAIPAAE--PLQSWFRSMTFSEACRNAADTVLLPRHLQEFTACLQKLPLPRP
##                                                                              
##     141        .         .         .         .         .         .         210 
## 
##     211        .         .         .         .         .         .         280 
## ref   --------------------------------------------------MTQVAKKILVTCALPYANGS
## dre   -PRRDSPSNSTEAEDSERELSPEEIEEAAQVYSEGLKDFTVVTERKHPVLPQEGKRNVLITSALPYVNNV
## xtr   -TPSGKPTCNEHEGEDMASLSEEDIQAAANAWAKGLTGAQKPKQRLHPILPVEGEKNVLITSALPYVNNV
## bta   -SLEGRLVSNEPEEEELATLSEEEIAVAVAAWEKGLESLPPLRPQQNPVLPVAGERNVLITSALPYVNNV
## ptr   -PTEGRAVTNEPEEEELATLSEEEIAMAVTAWEKGLESLPPLRPQQNPVLPVAGERNVLITSALPYVNNV
## ggo   -PPEGRAVTNEPEEEELATLSEEEIAMAVTAWEKGLESLPPLRPQQNPVLPVAGERNVLITSALPYVNNV
## hsa   -PAEGRAVTNEPEEEELATLSEEEIAMAVTAWEKGLESLPPLRPQQNPVLPVAGERNVLITSALPYVNNV
## rno   LPPEGRAVSNEPEEEELATLSEEDIIAAVAAWEKGLENLPPLQPQQHPVLPVPGERNVLITSALPYVNNV
## gga   -PPDTAPGCEEDDVSERA-LTEEDMAAAVDAWTRGAAALPKPWRPPKPVLPVEGMRNVLITSALPYVNNV
##                                                              ^ ^*^* **** *   
##     211        .         .         .         .         .         .         280 
## 
##     281        .         .         .         .         .         .         350 
## ref   IHLGHMLEHI-QADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFN
## dre   PHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATENKAREEGLTPQQICDKYHCIHASIYQWFQ
## xtr   PHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATETKAMEEGLTPQQICDKYNAVHTAIYQWFD
## bta   PHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEEGLTPQEICDKYHVIHADIYRWFN
## ptr   PHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEEGLTPQEICDKYHIIHADIYRWFN
## ggo   PHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEEGLTPQEICDKYHIIHADIYRWFN
## hsa   PHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEEGLTPQEICDKYHIIHADIYRWFN
## rno   PHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEEGLTPQEICDKYHAIHVDIYRWFN
## gga   PHLGNIIGCVLSADAFARYCRLRNWNTLYVCGTDEYGTATETKAVEEGLTPREICDKYHAVHADIYRWFD
##        *** ^^  ^  ** ^ ** *^*     ^^*^ *  **    **   *^**  ^       *   ^  *  
##     281        .         .         .         .         .         .         350 
## 
##     351        .         .         .         .         .         .         420 
## ref   ISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNC
## dre   IDFDFFGRTTTQHQTEIAQDIFWRLHERGFLLEDTVEQLRCEGCQRFLADRFVEGECPHCRFPEARGDQC
## xtr   ISFDFFGRTTTQHQTTIAQDIFHRLLKRDFLLTDTVEQLRCETCQRFLADRFVEGTCPFCNYEEARGDQC
## bta   ISFDFFGRTTTPQQTKITQDIFQRLLARGFVLQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQC
## ptr   ISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQC
## ggo   ISFDIFGRTTTPQQTKITQDIFQRLLKRGFVLQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQC
## hsa   ISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQC
## rno   ISFDTFGRTTTPLQTKITQDIFQRLLTRGFVLQDTVEQLRCEQCARFLADRFVEGVCPFCGYEEARGDQC
## gga   ISFDYFGRTTTPQQTVISQDIFQRLQAHGFVLQDTVQQLHCASCQRFLADRFVEGICPFCSYQEARGDQC
##       * ^* ^  * ^  ^  ^   *^  *    *^   *^ **       ** **** * ** *   ^  **^* 
##     351        .         .         .         .         .         .         420 
## 
##     421        .         .         .         .         .         .         490 
## ref   EVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAW----TRSGALQEQVANKMQEWFES
## dre   DKCGRLINAVELKNPQCKVCKETPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRD
## xtr   DKCGKLINAVELKKPQCKVCKKSPVKKSSKHLFLDLPKLEKRLEQWLEKSFSSGDWTSNARFITRSWIRD
## bta   DKCGKLINAIELKKPQCKVCRSCPVVKSSQHLFLDLPKLAARVEEWLEKTLPGSDWTANARFIIRSWLRD
## ptr   DKCGKLINAVELKKPQCKVCRSCPVVQSTQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRD
## ggo   DKCGKLINAVELKKPQCKVCRSCPVVQSTQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNARFITLSWLRD
## hsa   DKCGKLINAVELKKPQCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRD
## rno   DKCGKLINAIELKRPQCKVCRSHPVVKSSKHLFLDLPKLEKRLEDWLGKTMPGSDWTPNARFIIRSWLRD
## gga   DKCGKLINAVELKTPRCKLCSGSPTVRPTQHLFLDLPKLEERLQPWLENCWATGNWTANARYITRSWIRD
##       ^ **      **  *   ^    *    ^ * *  **     ^  *            ^       *    
##     421        .         .         .         .         .         .         490 
## 
##     491        .         .         .         .         .         .         560 
## ref   GLQQWDISRDAPYFGFEIP--NAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHF
## dre   GLKPRCITRDLKW-GTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQ------WERWWKNPQQVELYNF
## xtr   GLKPRCITRDLKW-GTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQ------WEKWWKSTQQVQLYHF
## bta   GLKPRCITRDLKW-GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQ------WEKWWKNPEQVNLYQF
## ptr   GLKPRCITRDLKW-GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQ------WERWWKNPEQVDLYQF
## ggo   GLKPRCITRDLKW-GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQ------WERWWKNPEQVDLYQF
## hsa   GLKPRCITRDLKW-GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQ------WERWWKNPEQVDLYQF
## rno   GLKPRCITRDLKW-GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQ------WERWWKNPEQVDLYQF
## gga   GLRPRCITRDLQW-GTPVPLDGFRDKVFYVWFDAPIGYLSITANYTEH------WERWWKNPQQVELYNF
##       **    *^**  ^ *  ^*      * **** ** ***^    *  ^       ^^ ^**      ** * 
##     491        .         .         .         .         .         .         560 
## 
##     561        .         .         .         .         .         .         630 
## ref   IGKDIVYFHSLFWPAMLEGS--NFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT
## dre   MAKDNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWRFYL
## xtr   MAKDNVPFHSVIFPSCLLGAEDNYTLVNHIIATEYLNYEDGKFSKSRGVGVFGDMAKDTGIPADIWRFYL
## bta   MAKDNVPFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFYL
## ptr   MAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFYL
## ggo   MAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFYL
## hsa   MAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFYL
## rno   MAKDNVPFHGLVFPCSALGAEDNYTLVKNLIATEYLNYEDGKFSKSRGIGVFGDMAQDTGIPADIWRFYL
## gga   MAKDNVPFHSVVFPCSLLGTDDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAKDTGIAADVWRFYL
##       ^^** * ** ^ ^*    *   *^     ^    *^     * *****  ^ ^           ^  ^*  
##     561        .         .         .         .         .         .         630 
## 
##     631        .         .         .         .         .         .         700 
## ref   AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGE
## dre   LYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFDGCV------PEMLLNDDDKRLIAQV
## xtr   LYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQKFFNGCV------PEMELLSEDKRLLAQV
## bta   LYNRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSKFFGGFV------PEMVLTSDDQRLLTHI
## ptr   LYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYV------PEMVLTPDDQRLLAHV
## ggo   LYIRPEGQDSAFSWMDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYV------PEMVLTPDDQRLLAHV
## hsa   LYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYV------PEMVLTPDDQRLLAHV
## rno   LYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCV------PEMVLTHDDRRLVAHV
## gga   LYVRPEGQDSAFSWGDLMLKNNSELLNNLGNFINRAGMFVCKFFGSAV------PPMVLTPDDHRLLARV
##               *      *   ^ * ^^^* ^ *   * ^ *^ * *   ^      * ^     *   ^    
##     631        .         .         .         .         .         .         700 
## 
##     701        .         .         .         .         .         .         770 
## ref   AWESREFGK---------AVREIMALADLANRYVDEQAPWVVAKQEGRDADLQ---AICSMGINLFRVLM
## dre   CWELKQYIQLLDKVRIRDALKCILNMSRHGNQYIQLNEPW--KKIKGGAEDRCRAGTVTGVSVNVACLLA
## xtr   AAELQQYNQHLEKVRIRDALRCILNISRHGNQYIQVNEPW--KCIKGNQQEQKRAGTVTGVAVNMAALLS
## bta   TLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPW--KRIKGGEADRQRAGTVTGLAVNIAALLS
## ptr   TLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPW--KRIKGSEADRQRAGTVTGLAVNIAALLS
## ggo   TLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPW--KRIKGSEADRQRAGTVTGLAVNIAALLS
## hsa   TLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPW--KRIKGSEADRQRAGTVTGLAVNIAALLS
## rno   SWELQRYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPW--KRIKGDEMDRQRAGTVTGMAVNIAALLS
## gga   TVELRQYHQLLERVRIRDALRCVLNISRHGNQYIQVNEPW--KRIKGGEEDRQRAGTVTGVAVNVAALLA
##         *   ^           *^^ ^^ ^   ^* *^  ^ **      *   ^      ^  ^ ^*^  ^*  
##     701        .         .         .         .         .         .         770 
## 
##     771        .         .         .         .         .         .         840 
## ref   TYLKPVLPKLTERAEAFLNTELTWDGIQQP---------LLGHKVNPFKALYNRIDMRQVEALVEASKEE
## dre   AVLEPFMPTVSLSIRSQLQAPESSSRAMLSGPGAFICTLPAGHRIGTVSPLFQKLENEQIEALRKRFGGL
## xtr   VMLHPYMPTVSGLIQEQLLMPQE-SKVLTTD---FCCRLQSGHQIGNVSPLFQKLENDQIESLRKRFGGG
## bta   VMLQPYMPTVSATIQAQLQLPPPACSILPTN---FLCTLPAGHQIGTVSPLFQKLENDQIESLKQRFSGG
## ptr   VMLQPYMPTVSATIQAQLQLPPPACSILLTN---FLCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGGG
## ggo   VMLQPYMPTVSATIQAQLQLPPPACSILLTN---FLCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGGG
## hsa   VMLQPYMPTVSATIQAQLQLPPPACSILLTN---FLCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGGG
## rno   VMLQPYMPTVSSTIQTQLQLPEAACRILATS---FICTLPAGHRIGTVSPLFQKLENDQIENLRQRFGGG
## gga   VLVQPYMPTVSAAIQAQLCVPPE-CSVLSHI---FTCTLPPGHRVGTVW--------GQHRGWREEGGGG
##         ^ * ^* ^^      *                       ** ^             *            
##     771        .         .         .         .         .         .         840 
## 
##     841        .         .         .         .         .         .         910 
## ref   VKAAAA----------------PVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLD
## dre   QPEEESAGLKTPSNSSVAVESKPNAGAAQHTP---ASVTADPERAKQLTALVA-----------------
## xtr   QVKTE-----------------SKAPPCQEAPLKEAPKASGPERVKELMQEVE-----------------
## bta   QAKAS-----------------PKTAA--------GLTTAGPQQIQALTEEVT-----------------
## ptr   QLEETF-------------DLKAKTSP--KPAVVETVTTARPQQIQALMDEVT-----------------
## ggo   QLEETF-------------DLKAKTSP--KPAVVETVTTARPQQIQALMDEVT-----------------
## hsa   Q---------------------AKTSP--KPAVVETVTTAKPQQIQALMDEVT-----------------
## rno   Q---------------------AKGSP--KPAVVEAVTTAGSQDIQVLVDEVT-----------------
## gga   GET-------------------PHPPPQLDPPSVPGKTPPDPSRIQELTEQVA-----------------
##                                                          ^                   
##     841        .         .         .         .         .         .         910 
## 
##     911        .         .         .         .         .         .         980 
## ref   LGGEKRNVFSGIRSAYPDPQALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGH
## dre   ---EQGEKVRALKAQKAEKSAI----GVEVAKLLDLKNQLCLAEGK--------------TPEPPAQKTK
## xtr   ---KQGNLVRELKGKKAEKSTI----DTEVQKLLALKKELALAEGK--------------SPDPPAQKGK
## bta   ---KQGNIVRELKAQKADKNQI----AAEVAKLLDLKKQLALAEGK--------------PLETS--KGK
## ptr   ---KQGNIVRELKAQKADKNEV----AAEVAKLLDLKKQLAVAEGK--------------PPEAP--KGK
## ggo   ---KQGNIVRELKAQKADKNEV----AAEVVKLLDLKKQLAVAEGK--------------PPEAP--KGK
## hsa   ---KQGNIVRELKAQKADKNEV----AAEVAKLLDLKKQLAVAEGK--------------PPEAP--KGK
## rno   ---KQGNIVRELKAQKADKNQV----AAEVAKLLDLKKQLALAEGK--------------PIETP--KGK
## gga   ---KQGNCVRQLKASGSDRARI----DSEVGKLLALKRELALAQNM--------------SPDGP--RGK
##                  ^^    ^   ^       *  *   *    ^                    ^      ^ 
##     911        .         .         .         .         .         .         980 
## 
##     981 983 
## ref   QVK
## dre   KK-
## xtr   KKK
## bta   KKK
## ptr   KKK
## ggo   KKK
## hsa   KKK
## rno   KKK
## gga   GKK
##           
##     981 983 
## 
## Call:
##   bio3d::seqaln(aln = sequences, id = id <- id, exefile = "muscle", 
##     outfile = paste(gsub(":", "_", target), "aln.fa", sep = "_"), 
##     protein = protein)
## 
## Class:
##   fasta
## 
## Alignment dimensions:
##   9 sequence rows; 983 position columns (599 non-gap, 384 gap) 
## 
## + attr: id, ali, call

We may wish repeat the analysis, but now comparing the bacterial protein with that from plants:

custom.aln(target = id.mapping(id = '1pfv', from = 'pdb', to = 'kegg'), species = 'plants')
##       1        .         .         .         .         .         .         70 
## ref   --------------------MTQVAKKILVTCALPYANGSIHLGHMLEHI-QADVWVRYQRMRGHEVNFI
## cre   -----------------PKRPIPGRRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRARGHNCIYV
## boe   ----------MEDGESCPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYI
## aly   ---------MEDDGKSNPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYI
## gmx   ----------MAENLIAPKLPVEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYI
## sly   MGDSSTAGNGDNLSPASPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRDYNIIYM
## osa   ----------MASPPPPPKLPVPGRRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYI
## ara   ---------------------MTEKTPFYITTAIAYPNGKPHIGHAYELI-ATDAMARFQRLDGRDVFFL
##                                    ^* *^ * *   *^*     ^   *   *^ *       ^^ 
##       1        .         .         .         .         .         .         70 
## 
##      71        .         .         .         .         .         .         140 
## ref   CADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGF
## cre   CGTDEYGTATETKALEEGLTCQQICDKYHAIHAGIYQWFDIAFDRFGRTPTRAQTKIAQDIFKSLQSRGQ
## boe   CGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVCQAIFKKLFENNF
## aly   CGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVCQAIFKKLWDNKW
## gmx   CGTDEYGTATETKAMEENCSPKEICDKYHAIHKEVYNWFNISFDEFGRTSSPEQTEVCQAIFRKIFENKW
## sly   CGTDEYGTATETKALEENCTPKQICDKYHAIHREVYKWFNISFDHFGRTSTPQQTEVCQAIFKKLWENNW
## osa   CGTDEYGTATETKAMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNW
## ara   TGTDEHGQKMQQTARAEGLSPQELADRNSAEFQAMGKLLNSSNDDYIRTTEERHHETSRNIWNLMADAGD
##        ^ *  *      *     ^   ^                   * ^  *           *^  ^      
##      71        .         .         .         .         .         .         140 
## 
##     141        .         .         .         .         .         .         210 
## ref   IKNRTISQLYDPEKGMFLPDRFVKGTCP--KCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRD
## cre   LVQQEMQQLYSEAAGKFLADRFVTGTCP--KCGYEDARGDQCDGCGNLLNPTELIRPKCKLTGTTPVMRS
## boe   LSENTMQQLYCDTCQKFLADRLVEGSCPFPECNYDSARGDQCEKCGKLLNPTELKDPRCKVCQTTPRIRD
## aly   LSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKCKVCQNTPRIRD
## gmx   LSENTMQQLYCNTCERFLADRLVEGTCPTPGCEYDSARGDQCEKCGKLLNPTELKNPRCKVCQKTPHIRD
## sly   LSENTMQQPYCETCKKFLADRLVEGNCPTPGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCRNTPCIRD
## osa   LTENTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKNTPRVRD
## ara   IYKDSYAGWYSVRDEAYYQENETELRAD--GVRY-----------GPQGTPVEWVQ--------------
##       ^        *      ^  ^                              * *                  
##     141        .         .         .         .         .         .         210 
## 
##     211        .         .         .         .         .         .         280 
## ref   SEHFFFDLPSFSEMLQA-W----TRSGALQEQVANKMQEWFESGLQQWDISR-DAPYFGFEIPNA--PGK
## cre   TRHVFLDLPQLSPQLQE-YITTTSAQGGWSANCVTLTNAWMRDGLKLRCITR-DLKW-GTPVPLEGFEEK
## boe   TDHLFIELPLLKDRLEK-YIDDTSVTGSWSQNAIQTTKAWLKEGLRQRCITR-DLKW-GVPVPHEKYKEK
## aly   TDHLFIELPLLKDRLEK-YINETSVAGSWSQNAIQTTNAWLRDGLRQRCITR-DLKW-GVPVPHEKYKEK
## gmx   TDHLFLELPLLKDRLEK-YISEMSVVGGWSQNAIQTTNSWLREGLKPRCITR-DLKW-GVPVPHEKYSDK
## sly   TDHLFLELPLLKDELEA-YVNDLSVAGGWSQNAIHTTHAWLREGLKPRCITR-DLKW-GVPVPHEKYKDK
## osa   TDHLFLELPLLSDKLVN-YINETSVAGMWSQNAIQATNAWLKEGLKPRCITR-DLKW-GVPVPHEKYKDK
## ara   EESYFFKLSEYQDRLLKLYEENPDFIGPAERR--NEVISFVKSGLKDLSISRTTFDW-GIKVPND--PAH
##           *  *      *   ^       *            ^   **    *^*    ^ *  ^*      ^ 
##     211        .         .         .         .         .         .         280 
## 
##     281        .         .         .         .         .         .         350 
## ref   YFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGS--NFRK
## cre   VFYVWFDAPIGYISITANYTPD------WEAWWKSPKDVELVQFMGKDNVPFHTVIFPATLLGTGGDWTM
## boe   VFYVWFDAPIGYVSITSCYTSE------WEKWWKNPENVELYQFMGKDNVPFHTVMFPSTQLGTGENWTL
## aly   VFYVWFDAPIGYVSITSCYTSE------WEKWWKNPENVELYQFMGKDNVPFHTVMFPSTQLGTGENWTL
## gmx   VFYVWFDAPIGYVSITSCYTHE------WEKWWKNPENVELYQFMGKDNVPFHTVMFPSTLLGTSENWTL
## sly   VFYVWFDAPIGYVSITSCYTTE------WEKWWKNPENVELYQFMGKDNVPFHTVIFPSTLLGTRENWTL
## osa   VFYVWFDAPIGYVSITASYTPD------WEKWWKDPDNVELFQFMGKDNVPFHTVMFPSTLLGTGEKWTM
## ara   VMYVWVDALTNYITATGYIEDRNNP---RAKYW--PADV---HIIGKDIIRFHAVYWPAFLMSA--KLPL
##         *** **   *^                  ^*           ^*** ^ ** ^ ^*             
##     281        .         .         .         .         .         .         350 
## 
##     351        .         .         .         .         .         .         420 
## ref   PSNLFVHGYVTVNGAKMSKSRGTFI---KASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRV--
## cre   MRNISVTEYLNYEGGKFSKSRGTGEQEEEESRLLTTIIVPGTPLCLFQTPPRRTPRRPFTHV-LRSTLPN
## boe   MKTISVTEYLNYETGKFSKSKGVGVFGNDVKD--TNIPVEVWRYYLLTNRP-EVSDTLFTWGDLQAKL--
## aly   MKTISVTEYLNYEDGKFSKSKGVGVFGNDVKD--TNIPVEVWRYYLLTNRP-EVSDTSFSWTDLQAKL--
## gmx   MKTISVTEYLNYEAGKFSKSKGIGVFGNDAKD--TNIPVEVWRYYLLTNRP-EVSDTLFTWPDLQAKL--
## sly   MKTISVTEYLNYEAGKFSKSKGVGVFGNDAKE--TNIPVEVWRYYLLTNRP-EVSDTLFSWVDLQAKL--
## osa   MKTISVTEYLNYEAGKFSKSHGIGVFGNDAKD--TNIPPEVWRYYLLTNRP-EVSDTLFTWADLQAKL--
## ara   PKRVFAHGFLLNKGEKMSKSLGNVV---DPVNLVNHFGLDQVRYFFLREVS-FGQDGSYSEEAIGTRI--
##          ^    ^^     * *** *                                             ^   
##     351        .         .         .         .         .         .         420 
## 
##     421        .         .         .         .         .         .         490 
## ref   NADIVNKVVNL--ASRNAGFINKR----FDGVLAS-----ELADPQLYKTFTDAAEVIGEAW----ESRE
## cre   SSQLFPTLPNLPTAPRALMFVSKF----FDGVVPGATAAGQAEAEELGKTVGPKVRVPVDEYIAAMERIK
## boe   TGELLNNLGNF--VNRVLSFIAKPEPSGYGSVIPDAP---GAESHPLTQSLAEKVGKFVKEYVEAMEKVK
## aly   NGELLNNLGNF--VNRVLSFIAKPNNAGYGSVIPDAH---DAESHPLTKSLAEKVEKFVAEYVEAMEKVK
## gmx   NSELLNNLGNF--INRVLSFIAKPAGQGYDSIIPSVPDNVSGDSHGPTKKLADKVAAYIDQYIEAMEKVK
## sly   NSELLNNLGNF--VNRVLSFIAKDPASGYGSIIPNPE---GAESHPLTKALGEKVGNYVEEYIEAMEKVK
## osa   NSELLNNLGNF--INRVLSFVAKPAGAGYDSIVPDAP---NAESHPLTKALVEKTNKWVEQYLEAMEKVK
## ara   NSDLANGIGNL--ASRSLSMIVKN----CDGKIPE-----CGELTEEDKALLAQADALLASTREDMGKQA
##          ^   ^ *     *    ^ *         ^                                      
##     421        .         .         .         .         .         .         490 
## 
##     491        .         .         .         .         .         .         560 
## ref   FGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFL
## cre   LKEGLRLVMSISADGNKFLQDTKPWVAVKED--KDKCATLVATSVGLVRLLSALMAPYMPSLS--AKILQ
## boe   LKQGLKIAMTISNEGNAYLQEAQFWKLFKED--KPSCAIVIRTAAGLVYLLAQLLEPFMPSFS--REVFK
## aly   LKQGLKTAMLISSEGNFYLQTSQFWKLYKED--KPLCAIVIRTAAGLVHLLAQLLEPFMPSFS--CEVFK
## gmx   LKQGLKTAMSISSEGNAYLQEAEFWRLYKEN--KSLCSLVMKTAAGIVYLLACLLEPFIPSFT--LEVFK
## sly   LKQGLKIAMSISGEGNGYLQESQFWRLYKED--RPSCSIVMSTASGLVYLLACLLEPFMPSFS--REVLK
## osa   LKQGLKSAMGISSDGNAYLQESQFWKLYKED--PAACAVVMKTSVGVVYLLACLLEPFMPSFS--NEVLL
## ara   LHRALASIIAVVSESDRYFAGQEPWALKKTD--PARMATVLYVTADVVRQIGILLQPFMPDSS--TKLLD
##          ^^   ^ ^      ^      *   *          ^      ^   ^   ^ * ^*  ^        
##     491        .         .         .         .         .         .         560 
## 
##     561        .         .         .         .         .         .         630 
## ref   NTELTWD-------------GIQQPL----LGHKVNPFKALYNRIDMRQVEALVE--ASKEEVK--AAAA
## cre   QLNLPYESSVALSDEL--VAGCRQPQSLVPAGHAIGTPGPLISTISDETVAELRARFGGNQADD--EAAA
## boe   QLNLPLQ--FSLSDEG----IASRLWEILPPGHRIGTPQPLFKELKDEEVQQYKDKFAGNQADR--RAR-
## aly   QLNLPPQ--FSLSDERGEVLLASKPWEILPPSHRIGTAQPLFKELENDEVTQYREKFAGSQADR----RA
## gmx   QLNLPADTHVSLSDDKGDVDRVKRPWDIISAGHKIGTPKPLFRELKDEEVEFYRKKFAGSQADR--IVRA
## sly   QLNFPPETKPSLSDDRGDIEKSKRPWNILPAGHKIGIPTPLFKELKDEEVEFYREKFAGSQADR--NLKA
## osa   QLNMTPEESLSFCDDKGEIAKAKRPWDFVSAGHKIGKPSPLFKELKDEEVESFRNKFAGSQAERSSKAQA
## ara   LIAIPSD---------------KRDFAALGEAGRLVPGTPL-----------------------------
##                                         ^     *                              
##     561        .         .         .         .         .         .         630 
## 
##     631        .         .         .         .         .         .         700 
## ref   PVTGPLADDPIQETITFD--------------------------DFAKVDLRVALIENAEFVEGSDKLLR
## cre   AATAGGAKPGDKKAAGGKGGADKQGGAAAAGGEKKAAR--EGTPDVSWLDVRVGVITKAWKHPDAESLYV
## boe   DVEAANMAEQLKKTKLSD-AKKQKASKGAGTSKPQPAA--TLEITMARLDIRVGKILKAEKHPNADSLYV
## aly   RDEAANLTDQLNKTKLSD-AKKQKASSSKGGGKPKPQPAADREITMARLDIRVGKIVKAERHPKADTLYV
## gmx   EAEAQNVAEQLKKTKVSDGNGKKKPGKSSNEAKNKAAA--EPDITITRLDIRVGLIIKAQKHPDADALYV
## sly   ETEARKITDQLHKAKISDANKKKERATKSSEAKAKGSASVEAEISISRLDIRVGLITRAQKHPDADSLYV
## osa   DAEAKKVADKLKGTKLSDGGQKKEQKKQSGGSKSKNA---EVDVTVAKLDIRVGLIRKAQKHPDADSLYV
## ara   ----------------------------------------------------------------------
##                                                                              
##     631        .         .         .         .         .         .         700 
## 
##     701        .         .         .         .         .         .         770 
## ref   LTLDLGGEK-RNVFSGIRSAYPDPQALIGRHTIMVANLAPRKMRFGISEGMVMAA--GPGGKDIFLLSPD
## cre   EEVDVGEPQPRQVVSGLVKYIPTAEALVGRRVVLLCNLKPAAMRGVQSQAMVLAAWTSAQQARLELLEPP
## boe   EQIDVGGGEIRTVVSGLVKYIPLEE-MQNRMVCVLCNLKPSKMRDIMSQAMVLAA-SSSDGSKVELVEPP
## aly   EEIDVGGGEIRTVVSGLVKYIPLEE-MQNRMVCVLCNLKPAKMRDIVSQAMVLAA-SSSDGSKVELVEPP
## gmx   EEIDVGEEQTRTVVSGLVKFIPLDE-MQNRKVCVLCNLKPVTMRGIKSQAMVLAA-SDGDHTKVELVEPP
## sly   EEIDVGEAQPRTVVSGLVKYIPLEE-MQNRKVCVLCNLKPASMRGIKSQAMVLAA-SNSDHTKVELVEPP
## osa   EEIDVGEEAPRTVVSGLVKFIPLEE-MQNRKVCVLCNLKPVAMRGIKSHAMVLAA-SNEDHTKVELVEPP
## ara   -------EAPKPVFPRYVA--PTVE---------------------------------------------
##                 ^ *        *                                                 
##     701        .         .         .         .         .         .         770 
## 
##     771        .         .         .         .         .         .        839 
## ref   AGAKPGHQVK-----------------------------------------------------------
## cre   AGAKVGERISWPGFPGEPEEQLNPRKKVFEAIQPDFTTDAGCVAVYKGAAFTTSAGPVKVATIVGASIK
## boe   ESATIGERVRFAGHEGEPDVVLNPKKKVWETLLVDLNTNENLVACYKDIPFTTDAGVCKVSSISNGTIR
## aly   ESANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTNENLVACYKDVPFTTSAGVCKVSSISNGTIR
## gmx   SSAQPGERITFPGYEGNPDELLNPKKKVWETLQVDLHTNEELVACYKNVPLTTSAGVCKVSSISCGSIR
## sly   KDAAIGERVMFPGLDGKADDVLNPKKKVWETLQVDLHTNKELVACYKDLPLTTSVGVCKVTSISEGSIR
## osa   ESAAVGERVTFAGYSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPFTTSAGVCKVKSIASGEIR
## ara   ---------------------------------------------------------------------
##                                                                             
##     771        .         .         .         .         .         .        839 
## 
## Call:
##   bio3d::seqaln(aln = sequences, id = id <- id, exefile = "muscle", 
##     outfile = paste(gsub(":", "_", target), "aln.fa", sep = "_"), 
##     protein = protein)
## 
## Class:
##   fasta
## 
## Alignment dimensions:
##   8 sequence rows; 839 position columns (496 non-gap, 343 gap) 
## 
## + attr: id, ali, call

Perphaps, at this point we would like to compare our target with much more sequences but in a narrower time window. In this case we should set either species = ‘one-hundred’ or species = ‘two-hundred’:

custom.aln(target = id.mapping(id = '1pfv', from = 'pdb', to = 'kegg'), species = 'one-hundred')
##        1        .         .         .         .         .         .         70 
## ref    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ebw    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecd    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecj    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecok   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## edh    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## edj    MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eun    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eck    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecm    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecoa   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecol   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecr    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ect    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecw    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecy    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ekf    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eko    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ell    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elw    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eoc    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eoh    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eoi    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eoj    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## esl    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## esm    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eso    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecoj   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecos   MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecq    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elf    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eln    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ena    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ese    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecoh   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecoo   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ece    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecf    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecs    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elr    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elx    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eok    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## etw    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecl    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecx    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elh    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elp    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sbo    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecp    MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecg    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ssn    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## efe    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eab    MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ebd    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ebe    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ebl    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ebr    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecc    MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eci    MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecoi   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecv    MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecz    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eih    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elc    MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eld    MPTMTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elu    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## shq    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sbc    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## esz    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sfe    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sfl    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sfn    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sfs    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sft    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sfv    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sfx    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sdy    ---MTQVAKQILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sdz    MPTMTQVAKQILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## elo    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eum    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ema    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## eal    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## cfar   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## cir    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## cro    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLS
## cko    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQLG
## caf    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNEVNFICADDAHGTPIMLKAQQLG
## cama   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## enl    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## cfq    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQLG
## cyo    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQLG
## eau    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## cpot   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQLG
## ebg    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## lei    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sek    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## spt    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## ecls   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## salz   ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## sea    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
## see    ---MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLG
##           ****** ************************************  *********************  
##        1        .         .         .         .         .         .         70 
## 
##       71        .         .         .         .         .         .         140 
## ref    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ebw    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecd    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecj    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecok   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## edh    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## edj    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eun    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eck    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecm    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecoa   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecol   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecr    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ect    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecw    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecy    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ekf    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eko    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ell    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## elw    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eoc    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eoh    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eoi    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eoj    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## esl    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## esm    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eso    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecoj   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecos   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecq    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## elf    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eln    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ena    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ese    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecoh   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecoo   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ece    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## ecf    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## ecs    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## elr    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## elx    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## eok    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## etw    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## ecl    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecx    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## elh    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## elp    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sbo    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecp    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecg    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## ssn    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## efe    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eab    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ebd    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ebe    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ebl    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ebr    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecc    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eci    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecoi   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecv    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ecz    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eih    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## elc    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eld    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## elu    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## shq    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sbc    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## esz    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sfe    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sfl    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sfn    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sfs    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sft    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sfv    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sfx    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sdy    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## sdz    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## elo    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## eum    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFL
## ema    ISPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## eal    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## cfar   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## cir    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## cro    VTPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSALIYSRLKENGFIKNRTISQLYDPEKGMFL
## cko    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## caf    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## cama   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## enl    VSPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## cfq    ITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## cyo    ITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## eau    ISPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## cpot   ITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## ebg    ISPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## lei    ISPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## sek    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## spt    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## ecls   ISPEQMIADMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## salz   ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## sea    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
## see    ITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFL
##        ^^*****^^************ ***********^*** ** ***^************************* 
##       71        .         .         .         .         .         .         140 
## 
##      141        .         .         .         .         .         .         210 
## ref    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ebw    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecd    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecj    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecok   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## edh    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## edj    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eun    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eck    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecm    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecoa   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecol   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecr    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ect    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecw    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecy    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ekf    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eko    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ell    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elw    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eoc    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eoh    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eoi    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eoj    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## esl    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## esm    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eso    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecoj   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecos   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecq    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elf    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eln    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ena    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ese    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecoh   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecoo   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ece    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecf    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecs    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elr    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elx    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eok    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## etw    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecl    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecx    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elh    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elp    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sbo    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecp    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecg    PDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ssn    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## efe    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eab    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ebd    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ebe    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ebl    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ebr    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecc    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eci    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecoi   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecv    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecz    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eih    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elc    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eld    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elu    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## shq    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sbc    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## esz    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sfe    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sfl    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sfn    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sfs    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sft    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sfv    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sfx    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sdy    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sdz    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## elo    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eum    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ema    PDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eal    PDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## cfar   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## cir    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## cro    PDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## cko    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## caf    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## cama   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## enl    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## cfq    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## cyo    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## eau    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## cpot   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ebg    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## lei    PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPEMRDSEHFFFDLPSFSEMLQAWTR
## sek    PDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## spt    PDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## ecls   PDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## salz   PDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## sea    PDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
## see    PDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTR
##        *************  ********************^********** *********************** 
##      141        .         .         .         .         .         .         210 
## 
##      211        .         .         .         .         .         .         280 
## ref    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ebw    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecd    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecj    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecok   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## edh    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## edj    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eun    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eck    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecm    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecoa   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecol   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecr    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ect    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecw    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecy    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ekf    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eko    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ell    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elw    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eoc    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eoh    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eoi    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eoj    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## esl    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## esm    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eso    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecoj   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecos   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecq    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elf    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eln    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ena    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ese    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecoh   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecoo   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ece    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecf    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecs    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elr    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elx    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eok    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## etw    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecl    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecx    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elh    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elp    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sbo    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecp    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecg    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ssn    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRSDSVS
## efe    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eab    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ebd    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ebe    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ebl    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ebr    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecc    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eci    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecoi   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecv    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## ecz    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eih    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elc    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## eld    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elu    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## shq    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sbc    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## esz    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sfe    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sfl    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sfn    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sfs    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sft    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sfv    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sfx    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sdy    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## sdz    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVS
## elo    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## eum    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## ema    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## eal    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## cfar   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## cir    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## cro    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTAS
## cko    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKFFYVWLDAPIGYMGSFKNLCNKRGDLTS
## caf    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## cama   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## enl    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## cfq    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## cyo    SGALQEQVANKMQEWFESGLQQWDISRDSPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## eau    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## cpot   SGALQEQVANKMQEWFESGLQQWDISRDSPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## ebg    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## lei    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## sek    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## spt    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## ecls   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVS
## salz   SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## sea    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
## see    SGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS
##        **************************** ******** ****^******************* ** *  * 
##      211        .         .         .         .         .         .         280 
## 
##      281        .         .         .         .         .         .         350 
## ref    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ebw    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecd    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecj    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecok   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## edh    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## edj    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eun    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eck    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecm    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecoa   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecol   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecr    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ect    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecw    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecy    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ekf    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eko    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ell    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## elw    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eoc    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eoh    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eoi    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eoj    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## esl    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## esm    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eso    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecoj   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecos   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecq    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## elf    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eln    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ena    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ese    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecoh   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecoo   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ece    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecf    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecs    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## elr    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## elx    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eok    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## etw    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecl    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecx    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## elh    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## elp    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sbo    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecp    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecg    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ssn    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## efe    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eab    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ebd    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ebe    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ebl    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ebr    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecc    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eci    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecoi   FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecv    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecz    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eih    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## elc    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eld    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## elu    FDKYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## shq    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sbc    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## esz    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sfe    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sfl    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sfn    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sfs    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sft    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sfv    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sfx    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sdy    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNSAKMSKSRGTFIKASTW
## sdz    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNSAKMSKSRGTFIKASTW
## elo    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eum    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ema    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eal    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## cfar   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## cir    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## cro    FDEYWKKDSSAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## cko    FDDYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## caf    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## cama   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## enl    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## cfq    FDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## cyo    FDEYWKKDSVAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## eau    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## cpot   FDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ebg    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## lei    FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sek    FDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## spt    FDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## ecls   FDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNYRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## salz   FDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## sea    FDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
## see    FDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTW
##        ** ****** ************************** ^***^*********** **************** 
##      281        .         .         .         .         .         .         350 
## 
##      351        .         .         .         .         .         .         420 
## ref    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ebw    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecd    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecj    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecok   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## edh    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## edj    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eun    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eck    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecm    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecoa   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecol   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecr    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ect    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecw    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecy    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ekf    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eko    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ell    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## elw    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eoc    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eoh    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eoi    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eoj    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## esl    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## esm    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eso    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecoj   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecos   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecq    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## elf    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eln    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ena    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ese    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecoh   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecoo   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ece    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecf    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecs    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## elr    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## elx    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eok    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## etw    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecl    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## ecx    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## elh    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## elp    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## sbo    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecp    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecg    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ssn    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## efe    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eab    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ebd    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## ebe    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## ebl    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## ebr    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## ecc    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eci    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecoi   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecv    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ecz    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eih    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## elc    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eld    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## elu    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## shq    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLANELADPQ
## sbc    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## esz    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sfe    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sfl    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sfn    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sfs    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sft    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sfv    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sfx    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sdy    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## sdz    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## elo    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## eum    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQ
## ema    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPE
## eal    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRCAGFINKRFDGVLAGELADPQ
## cfar   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNTDIVNKVVNLASRNAGFISKRFDGVLAAELADPA
## cir    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPA
## cro    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPE
## cko    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPA
## caf    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPA
## cama   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNTDIVNKVVNLASRNAGFISKRFDGVLATELADPA
## enl    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVMAAELADPA
## cfq    LKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVLAAELADPA
## cyo    LKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLANELADPA
## eau    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVMAAELADPA
## cpot   LKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLANELADPA
## ebg    LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVMAAELADPA
## lei    LNHFDADSLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVMAAELADPE
## sek    LKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPQ
## spt    LKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPQ
## ecls   LNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVMAAELADPA
## salz   LKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELADPQ
## sea    LKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPQ
## see    LKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPQ
##        * *********** ********************** ************ **** ******^* *****  
##      351        .         .         .         .         .         .         420 
## 
##      421        .         .         .         .         .         .         490 
## ref    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ebw    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecd    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecj    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecok   LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## edh    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## edj    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eun    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eck    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecm    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecoa   LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecol   LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecr    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ect    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecw    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecy    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ekf    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eko    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ell    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elw    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eoc    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eoh    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eoi    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eoj    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## esl    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## esm    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eso    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecoj   LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecos   LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecq    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elf    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eln    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ena    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ese    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecoh   LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecoo   LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ece    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecf    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecs    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elr    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elx    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eok    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## etw    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecl    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecx    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elh    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elp    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sbo    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQESRDADLQAICSMGINLFRV
## ecp    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecg    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ssn    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## efe    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eab    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ebd    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ebe    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ebl    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ebr    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecc    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eci    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecoi   LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecv    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecz    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eih    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elc    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eld    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elu    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## shq    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sbc    LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## esz    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sfe    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sfl    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sfn    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sfs    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sft    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sfv    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sfx    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sdy    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sdz    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## elo    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eum    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ema    LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eal    LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## cfar   LYKTFTDAATVIGEAWESREFNKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## cir    LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## cro    LYKTFTDAATVIGEAWESREFGKAIREIMALADQANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## cko    LYKTFTDAAAVIGEAWESREFGKAIREIMALADMANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## caf    LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## cama   LYKTFTDAATMIGDAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## enl    LYKTFTDAAATIGDAWETREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## cfq    LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## cyo    LYKTFTDAAVVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## eau    LYKTFTDAATTIGEAWEAREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## cpot   LYKTFTDAAVVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ebg    LYQTFTDAAATIGEAWETREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## lei    LYKTFTDAAAVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sek    LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## spt    LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## ecls   LYQTFTDAAATIGEAWETREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## salz   LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## sea    LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
## see    LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRV
##        ** ******  **^*** *** **^******** ***************** ****************** 
##      421        .         .         .         .         .         .         490 
## 
##      491        .         .         .         .         .         .         560 
## ref    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## ebw    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## ecd    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## ecj    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## ecok   LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## edh    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## edj    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## eun    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## eck    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecm    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecoa   LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecol   LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecr    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ect    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecw    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecy    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ekf    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eko    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ell    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## elw    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eoc    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eoh    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eoi    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eoj    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## esl    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## esm    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eso    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecoj   LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecos   LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecq    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## elf    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eln    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ena    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ese    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecoh   LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## ecoo   LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## ece    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecf    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecs    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## elr    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## elx    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eok    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## etw    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecl    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecx    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## elh    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## elp    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## sbo    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAP
## ecp    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecg    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ssn    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## efe    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAP
## eab    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## ebd    LMTYLKPVLPKLTERAEAFLNTALTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ebe    LMTYLKPVLPKLTERAEAFLNTALTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ebl    LMTYLKPVLPKLTERAEAFLNTALTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ebr    LMTYLKPVLPKLTERAEAFLNTALTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecc    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## eci    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## ecoi   LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## ecv    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## ecz    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## eih    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## elc    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## eld    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## elu    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## shq    LMTYLKPVLPKLTERAEAFLNTALTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## sbc    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLDHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## esz    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## sfe    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAP
## sfl    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAP
## sfn    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAP
## sfs    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAP
## sft    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAP
## sfv    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAP
## sfx    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAP
## sdy    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## sdz    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAP
## elo    LMTYLKPVLPKLTERAEAFLNTELTWHGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAATP
## eum    LMTYLKPVLPKLTERAEAFLNTELTWHGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAATP
## ema    LMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLAHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAP
## eal    LMTYLKPVLPNLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAATP
## cfar   LMTYLKPVLPTLSERVEAFLNTELSWDAIAQPLLGHKVNTFKALYNRIDMKQVDALVEASKEEVKAMAAP
## cir    LMTYLKPVLPTLSERVEAFLNSELRWDAIAQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAMAAP
## cro    LMTYLKPVLPTLSERVEAFLNAELRWDAIAQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
## cko    LMTYLKPVLPTLSERVEAFLNTELSWDAIAQPLLGHKVNAFKALYNRIDMKQVDALVEASKEEVKAAAAP
## caf    LMTYLKPVLPTLSERVEAFLNSELRWDAIAQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAMAAP
## cama   LMTYLKPVLPTLSERVEAFLNTELSWDTVQQPLLGHKVNTFKALYNRIDMKQVDALVEASKEEVKAMTAP
## enl    LMTYLKPVLPQLAARAEAFLNTELSWDAIQQPLLGHKVNTFKALYNRIEMKQVEALVEASKEEVKAAAAP
## cfq    LMTYLKPVLPTLAERVEAFLNSELSWDAIKQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
## cyo    LMTYLKPVLPTLAERVEAFLNSELSWDAIEQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
## eau    LMTYLKPVLPQLAARAEAFLNTELTWDAMAQPLLGHKVNTFKALYNRIEMKQVEALVEASKEEVKAAAAP
## cpot   LMTYLKPVLPTLAERVEAFLNSELSWDAIEQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ebg    LMTYLKPVLPQLAARAEAFLNTELTWDAMAQPLLGHKVNTFKALYNRIEMKQVEALVEASKEEVKAAAAP
## lei    LMSYLKPVLPQLAARTEAFLNTELSWDSINQPLLGHKLNAFKALYNRIEMKQVEALVEASKEEVKAAAAP
## sek    LMTYLKPVLPTLSERVEAFLNSELNWDAIEQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
## spt    LMTYLKPVLPTLSERVEAFLNSELNWDAIEQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
## ecls   LMTYLKPVLPQLAARAEAFLNTELTWDAIQQPLLGHKVNTFKALYNRIEMKQVEALVEASKEEVKAAAAP
## salz   LMTYLKPVLPTLSERVEAFLNSELNWDAIEQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
## sea    LMTYLKPVLPTLSERVEAFLNSELNWDAIEQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
## see    LMTYLKPVLPTLSERVEAFLNSELNWDAIEQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAP
##        **^******* *  * *****  * *  ^ **** **^* ********^*^**^************   * 
##      491        .         .         .         .         .         .         560 
## 
##      561        .         .         .         .         .         .         630 
## ref    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ebw    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecd    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecj    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecok   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## edh    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## edj    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eun    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eck    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecm    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecoa   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecol   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecr    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ect    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecw    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecy    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ekf    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eko    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ell    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elw    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eoc    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eoh    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eoi    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eoj    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## esl    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## esm    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eso    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecoj   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecos   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecq    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elf    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eln    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ena    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ese    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecoh   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVGGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecoo   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVGGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ece    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecf    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecs    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elr    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elx    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eok    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## etw    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecl    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecx    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elh    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elp    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sbo    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecp    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecg    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ssn    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## efe    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eab    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ebd    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ebe    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ebl    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ebr    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecc    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eci    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecoi   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecv    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecz    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eih    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elc    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eld    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elu    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## shq    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sbc    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## esz    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sfe    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sfl    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sfn    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sfs    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sft    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sfv    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sfx    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sdy    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sdz    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## elo    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eum    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ema    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## eal    VAGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## cfar   VTGPLADDPIQETISFDDFAKVDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## cir    VTGPLADFPIQETITFDDFAKVDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## cro    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## cko    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## caf    VTGPLADFPIQETITFDDFAKVDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## cama   VTGPLADFPIQETINFDDFAKVDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## enl    VTGPLADDPIQETITFDDFAKIDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## cfq    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQTLV
## cyo    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## eau    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## cpot   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## ebg    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## lei    VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sek    VTGPLADFPIQETITFDDFAKIDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## spt    VTGPLADFPIQETITFDDFAKIDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## ecls   VTGPLADDPIQETITFDDFAKVDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQVLI
## salz   VTGPLADFPIQETITFDDFAKIDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## sea    VTGPLADFPIQETITFDDFAKIDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
## see    VTGPLADFPIQETITFDDFAKIDLRVALIENAEFVDGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALI
##        * ***** ****** ******^************* ******************************* *^ 
##      561        .         .         .         .         .         .         630 
## 
##      631        .         .         .         .         680 
## ref    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ebw    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecd    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecj    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecok   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## edh    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## edj    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eun    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eck    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecm    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecoa   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecol   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecr    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ect    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecw    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecy    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ekf    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eko    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ell    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elw    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eoc    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eoh    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eoi    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eoj    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## esl    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## esm    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eso    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecoj   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecos   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecq    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elf    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eln    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ena    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ese    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecoh   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecoo   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ece    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecf    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecs    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elr    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elx    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eok    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## etw    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecl    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecx    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elh    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elp    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sbo    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecp    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecg    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ssn    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## efe    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eab    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ebd    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ebe    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ebl    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ebr    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecc    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eci    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecoi   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecv    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ecz    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eih    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elc    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eld    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elu    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## shq    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sbc    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## esz    GRHTIMLANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sfe    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sfl    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sfn    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sfs    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sft    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sfv    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sfx    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sdy    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sdz    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## elo    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eum    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## ema    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## eal    GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## cfar   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDEGAKPGHQVK
## cir    GRHTVMVANLAPRKMRFGISEGMVMAAGPGGTDIFLLTPDEGAKPGHQVK
## cro    GRHTVMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLTPDAGAKPGQQVK
## cko    GRHTVMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK
## caf    GRHTVMVANLAPRKMRFGISEGMVMAAGPGGTDIFLLTPDEGAKPGHQVK
## cama   GRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLTPDEGAKPGHQVK
## enl    GRQTVMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDEGAKPGQQVK
## cfq    GRQTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDEGAKPGQQVK
## cyo    GRQTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDEGAKPGQQVK
## eau    GRQTVMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDEGAKPGQQVK
## cpot   GRQTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDEGAKPGQQVK
## ebg    GRQTVMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDEGAKPGQQVK
## lei    GRHTVMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDSGALPGHQVK
## sek    GRQTVMVANLAPRKMRFGVSEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK
## spt    GRQTVMVANLAPRKMRFGVSEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK
## ecls   GRQTVMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDEGAKPGQQVK
## salz   GRQTVMVANLAPRKMRFGVSEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK
## sea    GRQTVMVANLAPRKMRFGVSEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK
## see    GRQTVMVANLAPRKMRFGVSEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK
##        ** *^*^***********^************ *****^** ** ** *** 
##      631        .         .         .         .         680 
## 
## Call:
##   bio3d::seqaln(aln = sequences, id = id <- id, exefile = "muscle", 
##     outfile = paste(gsub(":", "_", target), "aln.fa", sep = "_"), 
##     protein = protein)
## 
## Class:
##   fasta
## 
## Alignment dimensions:
##   101 sequence rows; 680 position columns (677 non-gap, 3 gap) 
## 
## + attr: id, ali, call

If we wonder what species is, for instance, ‘see’, all we have to type is:

species.kegg('see', from = '3-letter')
##     organism                                                   species
## 633      see Salmonella enterica subsp. enterica serovar Newport SL254

Of course, we can make a taylored list of species:

yeast <- species.kegg('budding yeast', from = 'vulgar')
human <- species.kegg('Homo sapiens', from = 'scientific')
species <- rbind(yeast, human)
species
##     organism                                  species
## 357      sce Saccharomyces cerevisiae (budding yeast)
## 1        hsa                     Homo sapiens (human)

and then run the alignment

custom.aln(id.mapping(id = '1pfv', from = 'pdb', to = 'kegg'), species = species$organism)
##       1        .         .         .         .         .         .         70 
## ref   ----------------------------------------------------------------------
## sce   MSFLISFDKSKKHPAHLQLANNLKIALALEYASKNLKPEVDNDNAAME-LRNTKEPFL-------LFDAN
## hsa   MRLFV----SDGVPGCLPV---LAAAGRARGRAEVLISTVGPEDCVVPFLTRPKVPVLQLDSGNYLFSTS
##                                                                              
##       1        .         .         .         .         .         .         70 
## 
##      71        .         .         .         .         .         .         140 
## ref   ----------------------------------------------------------------------
## sce   AILRYVM-------DDFEGQ----TSDKYQFALASL-----------QNLLYHKELPQQHVEVLTNKAIE
## hsa   AICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRALTHIDHSLSRQNC
##                                                                              
##      71        .         .         .         .         .         .         140 
## 
##     141        .         .         .         .         .         .         210 
## ref   -------------------------------------------------MTQVA----------------
## sce   NYLVELKEPLTTTDLILFANVYAL---------NSSLVHSKFPEL----PSKVHNAVALAKKHV------
## hsa   PFLAGETESL--ADIVLWGALYPLLQDPAYLPEELSALHSWFQTLSTQEPCQRAAETVLKQQGVLALRPY
##                                                                              
##     141        .         .         .         .         .         .         210 
## 
##     211        .         .         .         .         .         .         280 
## ref   --------------------------------------------------------------KKILVTCA
## sce   --------PRDSSSFKN---------IGAVKIQADLT-----------VKPKDSEILPKPNERNILITSA
## hsa   LQKQPQPSPAEGRAVTNEPEEEELATLSEEEIAMAVTAWEKGLESLPPLRPQQNPVLPVAGERNVLITSA
##                                                                     ^ ^*^* * 
##     211        .         .         .         .         .         .         280 
## 
##     281        .         .         .         .         .         .         350 
## ref   LPYANGSIHLGHMLEHI-QADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQ
## sce   LPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEEGVTPRQLCDKYHKIHS
## hsa   LPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEEGLTPQEICDKYHIIHA
##       *** *   *** ^^  ^  **^^ ** ^ *     ^^*^ *  **    **   *^**  ^       *  
##     281        .         .         .         .         .         .         350 
## 
##     351        .         .         .         .         .         .         420 
## ref   TDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSP
## sce   DVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMKQLYCPVHNSYLADRYVEGECPKCHYD
## hsa   DIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVEQLRCEHCARFLADRFVEGVCPFCGYE
##         ^  *^* ^* ^  * ^  ^  ^   *^  *   *^^   ^^ **       ^* **^* * ** *    
##     351        .         .         .         .         .         .         420 
## 
##     421        .         .         .         .         .         .         490 
## ref   DQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAW----TRSGALQEQVANK
## sce   DARGDQCDKCGALLDPFELINPRCKLDDASPEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTI
## hsa   EARGDQCDKCGKLINAVELKKPQCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI
##       ^  **^*^ **      **  *   ^    *    * * *  *      ^  *            ^     
##     421        .         .         .         .         .         .         490 
## 
##     491        .         .         .         .         .         .         560 
## ref   MQEWFESGLQQWDISRDAPYFGFEIP--NAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDS
## sce   TQSWLKDGLKPRCITRDLVW-GTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKE------WKQWWNNPE
## hsa   TRSWLRDGLKPRCITRDLKW-GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQ------WERWWKNPE
##          *   **    *^**  ^ *  ^*      *  *** ** ***^    *          ^  ^*     
##     491        .         .         .         .         .         .         560 
## 
##     561        .         .         .         .         .         .         630 
## ref   TAELYHFIGKDIVYFHSLFWPAMLEGS--NFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNH-FDA
## sce   HVSLYQFMGKDNVPFHTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISP
## hsa   QVDLYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPA
##          ** *^^** * **^^ ^*    *   *^     *    *^    ^* *****  ^ ^           
##     561        .         .         .         .         .         .         630 
## 
##     631        .         .         .         .         .         .         700 
## ref   DSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYK---
## sce   SVWRY-YLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPK--FDPKKVSNYD
## hsa   DIWRF-YLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPEMVLTPDDQR---
##          *^ *   ^     *      * ^ ^ * ^^^  ^ *   *   *^   ^ * ^      *        
##     631        .         .         .         .         .         .         700 
## 
##     701        .         .         .         .         .         .         770 
## ref   -TFTDAAEVIGEAWESREFGK---AVREIMALADLANRYVDEQAPWVVAKQEGRD-ADLQAICSMGINLF
## sce   GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPE--KSDAVVAVGLNII
## hsa   -LLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAGTVTGLAVNIA
##                ^       *  ^   ^^   ^ ^   ^* ^^  ^           ^      ^  ^^^*^  
##     701        .         .         .         .         .         .         770 
## 
##     771        .         .         .         .         .         .         840 
## ref   RVLMTYLKPVLPKLTERAEAFLNT-----ELTWDGIQQPLL-GHKVNPFKALYNRIDMRQVEAL-VEASK
## sce   YAVSSIITPYMPEIGEKINKMLNAPALKID---DRFHLAILEGHNINKAEYLFQRIDEKKIDEWRAKYGG
## hsa   ALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGG
##         ^   ^ * ^* ^       *^                ^  ** ^     *^^^^^   ^^         
##     771        .         .         .         .         .         .         840 
## 
##     841        .         .         .         .         .         .         910 
## ref   EEVKAAAAPVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRS
## sce   QQV-------------------------------------------------------------------
## hsa   GQAKTSPKPAV----------------------------VETVTTAKPQQIQALMDEVTKQGNIVRELKA
##                                                                              
##     841        .         .         .         .         .         .         910 
## 
##     911        .         .         .         .         .        969 
## ref   AYPDPQALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK
## sce   -----------------------------------------------------------
## hsa   QKADKNEVAAE----VAKLLDLKKQLAVAEGKPPEAPKGKKKK----------------
##                                                                   
##     911        .         .         .         .         .        969 
## 
## Call:
##   bio3d::seqaln(aln = sequences, id = id <- id, exefile = "muscle", 
##     outfile = paste(gsub(":", "_", target), "aln.fa", sep = "_"), 
##     protein = protein)
## 
## Class:
##   fasta
## 
## Alignment dimensions:
##   3 sequence rows; 969 position columns (537 non-gap, 432 gap) 
## 
## + attr: id, ali, call

If instead of proteins we want to align DNA sequences, all we should do is pass the argument molecule = ‘dna’ to the function custom.aln():

custom.aln(target = id.mapping(id = '1pfv', from = 'pdb', to = 'kegg'), 
           species = species$organism,
           molecule = 'dna')
##       1        .         .         .         .         .         .         70 
## ref   ATGACTCAAGTCG----CGAAGAAAATTCTGGTGA----CGTGCGCA-CTGCCGTACGCTAACGGCT--C
## sce   ATGTCTTTCCTCATTTCCTTTGATAAATCGAAGAAACATCCTGCCCATTTGCAGTTAGCGAACAATTTGA
## hsa   ATGAGACTGTTCGTGAGTGATGGCGTCCCGGGTTG----CTTGCCGG--TGCTGGCCGCCGCCGG----G
##       ***       **^        *^ ^   * ^^  ^    * ***  ^  *** *   ** ^ *^^      
##       1        .         .         .         .         .         .         70 
## 
##      71        .         .         .         .         .         .         140 
## ref   AATCCACCTCGGCCATATGCTGGAGCACATCCAGGCTG-ATGTCTGGGTCCGTTACCAGCGAATGCGCGG
## sce   AGATTGCCCTAGCACT-TGAATATGCAAGCAAAAATTTAAAGCCTGAA---GTTGACAATGATAATGCTG
## hsa   AGAGC-CCGGGGCAGAGCAGAGGTGCTCATCAGCACTGTAGGCCCGGA-----------AGATTGTGTGG
##       *^    **  ^**     ^   ^ **  ^   ^ ^ *  * * * *^^            **  ^ *  * 
##      71        .         .         .         .         .         .         140 
## 
##     141        .         .         .         .         .         .         210 
## ref   CCACG----------------------------------------AGGTCAACTTCATCTGCGCCGACGA
## sce   CCATGGAATTG-------------------------CGCAATACAAAGGAACCTTTCCTTTTGTT--TGA
## hsa   TCCCGTTCCTGACCCGGCCTAAGGTCCCTGTCTTGCAGCTGGATAGCGGCAACTACCTCTTCTCCACTAG
##        *  *                                        ^ *  * **     *        ^^ 
##     141        .         .         .         .         .         .         210 
## 
##     211        .         .         .         .         .         .         280 
## ref   TGCCCACGGTACACCGA----TCATGCTGAAAGCT------CAGCAGCTTGGTATCACCCCGGAGCAGAT
## sce   TGCTAACGCTATTCTAAGATATGTCATGGATGATT------TTGAAGGTCAAACTTCC---------GAC
## hsa   TG----CAATCTGCCGATATTTTTTTTTGTTATCTGGCTGGGAGCAAGATGACCTCACT--------AAC
##       **    *^ *   * ^*    *      *  ^  *        * *^   ^^  *  *         ^*  
##     211        .         .         .         .         .         .         280 
## 
##     281        .         .         .         .         .         .         350 
## ref   GATTGGCGAAATGAGTCAGGAGCATCAGACTGATTTCGCAGGCTTTAA----------------------
## sce   AAGTATCAATTTGCATTGGCATCTTTACA------AAACCTGTTATAT----------------------
## hsa   CAGTGGC---TGGAATGGGAAGCGACAGA--GCTGCAGCCAGCTTTGTCTGCTGCCCTGTACTATTTAGT
##        * *^ *     * ^* ^* * *   * *        ^*  * * *^                        
##     281        .         .         .         .         .         .         350 
## 
##     351        .         .         .         .         .         .         420 
## ref   ---------CATCAGCTATGACAACTATCACTCGACGCACAGCGAAGAGAACCGCC--------------
## sce   ---------CATAAAGAATTAC--------CTCAACAACATGTCGAG-GTTTTGAC-------------A
## hsa   GGTCCAAGGCAAGAAGGGGGAAGATGTT--CTTGGTTCAGTGCGGAGAGCCCTGACTCACATTGACCACA
##                **  *^  ^  *         ** ^^      *  ^** *    * *               
##     351        .         .         .         .         .         .         420 
## 
##     421        .         .         .         .         .         .         490 
## ref   -----AGTTGTCAGAACTTATCTACTCTCGCCTGAAAGAAA---------------ACGGTTTTATTAAA
## sce   AATAAGGCCATTGAAAATTA-----CTTGGTCGAATTAAAAGAACCATTGACTACTACAGATTTG-----
## hsa   GCTTGAGTCGTCAGAACTGTCCTTTCCTGGCTGGGGAGACAGAATCTCTAGCCGACATTGTTTTGTGGGG
##            ^*  ^* ^^** *         * *   ^^  ^* *               *  * ***^      
##     421        .         .         .         .         .         .         490 
## 
##     491        .         .         .         .         .         .         560 
## ref   AACCGCA---CCATCTCTCAGCTGTACGATCCGGAAAAAGGCATGTTCCTGCCGGACC--GTTTTGTGAA
## sce   ------ATCCTGTTTGCTAACGTTTATGCTC----------TAAATTCTT----------CTTTAGTTCA
## hsa   AGCCCTATACCCATTAC-----TGCAAGATCCCGCC-----TACCTCCCTGAGGAGCTGAGTGCCCTGCA
##             *      *  *     *  * * **           *  * * *           *    *  * 
##     491        .         .         .         .         .         .         560 
## 
##     561        .         .         .         .         .         .         630 
## ref   AGGCACCTGCCCGAAATGTAAATCCCCGG-----ATCAATA-CGGCGATAACTGCGAAGTCTGCGGCGCG
## sce   TTCTAAATTCCCAGAATTGCCATCCAAAGTGCATAACGCTG-TAGCATTGGCTAAAAAGCATGTTCCACG
## hsa   CAGCTGGTTCCAGACACTGAGTACCCAGG-----AACCATGTCAGCG--AGCTGCAGAGACTGTACTGAA
##              * ** ^^ *       **  ^*     * *  *^  ^**^  ^^**^ ^^**  **    ^ ^ 
##     561        .         .         .         .         .         .         630 
## 
##     631        .         .         .         .         .         .         700 
## ref   -----------------------------------------ACCTACAGCCCGA----------------
## sce   ----------------------TGATTCTTCTTCTTTCAAAAACATCGGCGCAG----------------
## hsa   ACAGCAAGGTGTCCTGGCTCTCCGGCCTTACCTCCAAAAGCAGCCCCAGCCCAGCCCCGCTGAGGGAAGG
##                                                * *  *^** *^^                 
##     631        .         .         .         .         .         .         700 
## 
##     701        .         .         .         .         .         .         770 
## ref   -------------------------------------------CTGA----------------------A
## sce   -------------------------------TGAAAATCCAAGCTGA-------------------CTTA
## hsa   GCTGTCACCAATGAGCCTGAGGAGGAGGAGCTGGCTACCCTATCTGAGGAGGAGATTGCTATGGCTGTTA
##                                                  ****                      * 
##     701        .         .         .         .         .         .         770 
## 
##     771        .         .         .         .         .         .         840 
## ref   CTGATCGAGCCGAAA---TCGGTGGTTT-CTGGCGCTACG-------------CCGGTAATGCGTGATTC
## sce   ACAGTTAAGCCAAAGGATTCAGAAATTT--------------------------------TGCCTAAGCC
## hsa   CTGCTTGGGAGAAGGGCCTAGAAAGTTTGCCCCCGCTGCGGCCCCAGCAGAATCCAGTGTTGCCTGTGGC
##         ^ * ^^*  ^*^^   * ^^ ^^***                                *** *^   * 
##     771        .         .         .         .         .         .         840 
## 
##     841        .         .         .         .         .         .         910 
## ref   TGAACA------------CTTCTTCTTTGATCTGCCCTCTTTCAGCGAAATGTTGCAGGCATGGACCCGC
## sce   AAACGAAAGAAACATCTTGATCACTTCGGCATTACCTTATGTCAACAACGTTCCACACTTGGGTAATATC
## hsa   TGGAGAAAGGAATGTGCTCATCACCAGTGCCCTCCCTTACGTCAACAATGTCCCCCACCTTGGGAACATC
##        ^^  *              **      *   * ** *   ***^*^* ^*    **     * *    * 
##     841        .         .         .         .         .         .         910 
## 
##     911        .         .         .         .         .         .         980 
## ref   AGCGGT-GCGTTGCAGGAGCAGGTG------------------------GCAAATAAAATGC-------A
## sce   ATCGGTAGTGTTCTTTCAGCAGACATTTTTGCTCGTTACTGTAAGGGACGTAATTATAATGCCTTGTTTA
## hsa   ATTGGTTGTGTGCTCAGTGCCGATGTCTTTGCCAGGTACTCTCGCCTCCGCCAGTGGAACACCCTCTATC
##       *  *** * **       ** *^ ^                        *  * *^ ** ^*         
##     911        .         .         .         .         .         .         980 
## 
##     981        .         .         .         .         .         .         1050 
## ref   GGAGTGGT----TTGAATCTGGC-CTGCAACAG-------------------------------------
## sce   TTTGTGGTACTGATGAATATGGTACTGCCACGGAAACTAAAGCTTTGGAGGAAGGTGTGACACCAAGACA
## hsa   TGTGTGGGACAGATGAGTATGGTACAGCAACAGAGACCAAGGCTCTGGAGGAGGGACTAACCCCCCAGGA
##          ****      ***^* ***  * ** **^*                                      
##     981        .         .         .         .         .         .         1050 
## 
##    1051        .         .         .         .         .         .         1120 
## ref   ----TGGGATATCTCCCGCGACGCCC---------CTTAC-------------TTCGGTTTTGAAATTCC
## sce   ATTATGTGACAAATATCACAAAATCCACAGTGACGTTTACAAGTGGTTCCAAATTGGATTTGATTATTTC
## hsa   GATCTGCGACAAGTACCACATCATCCATGCTGACATCTACCGCTGGTTTAACATTTCGTTTGATATTTTT
##           ** ** *  *  *^*^  ^ **           ***             **  ^*** ^   **   
##    1051        .         .         .         .         .         .         1120 
## 
##    1121        .         .         .         .         .         .         1190 
## ref   GAACGCGCCG---------GGCAA----------------ATATTTCTACG-------------------
## sce   GGTAGAACTACGACGGACAAGCAAACGGAGATTGCTCAACATATTTTTACAAAGCTAAATTCGAATGGTT
## hsa   GGTCGCACCACCACTCCACAGCAGACCAAAATCACCCAGGACATTTTCCAGCAGTTGCTGAAACGAGGTT
##       *^  * ^* ^         ^***^                * ****    ^                    
##    1121        .         .         .         .         .         .         1190 
## 
##    1191        .         .         .         .         .         .         1260 
## ref   ----------------------------------------------------TCTGGCTGGACGCACCG-
## sce   ATCTAGAAGAACAATCTATGAAGCAATTGTACTGTCCAGTTCATAATTCTTATCTGGCTGATCGTTACGT
## hsa   TTGTGCTGCAAGATACTGTGGAGCAACTGCGATGTGAGCACTGTGCTCGCTTCCTGGCTGACCGCTTCGT
##                                                            *******^ **   **  
##    1191        .         .         .         .         .         .         1260 
## 
##    1261        .         .         .         .         .         .         1330 
## ref   -------------------ATTGGCTACATGGGTTCTTTCAAGAATCTGTGCGACAAGCGCGGCGACAGC
## sce   GGAAGGTGAATGTCCAAAATGTCACTACGATGATGCTCGTGGGGATCAATGTGACAAATGTGGTGCCCTG
## hsa   GGAGGGCGTGTGTCCCTTCTGTGGCTATGAGGAGGCTCGGGGTGACCAGTGTGACAAGTGTGGCAAGCTC
##                            * ^*** ^  *^  **   ^^ ^* * ^** *****^ * ** ^      
##    1261        .         .         .         .         .         .         1330 
## 
##    1331        .         .         .         .         .         .         1400 
## ref   GTAAGCTTCGATGAATACTGGAAG-------AAAGACTCCACCGCCGAGCTGTACCACTTCATCGGTAAA
## sce   TTAGATCCATTTGAATTGATCAATCCACGTTGTAAATT----AGATGA----TGCTTCTCCAGAACCAAA
## hsa   ATCAATGCTGTCGAGCTTAAGAAGCCTCAGTGTAAAGTCTGCCGATCA----TGC----CCTGTGGTGCA
##        * ^^       **^      **        ^ *^* *     *   *    *^*     *   ^  ^ * 
##    1331        .         .         .         .         .         .         1400 
## 
##    1401        .         .         .         .         .         .         1470 
## ref   G--------ATATTGTTTACTTCCACAGCCTGTTCTGGCCTGCCA-----------------------TG
## sce   ATATTCTGATCATATTTTCCTATCGCTGGATAAATTAGAAAGCCAAATTTCTGAATGGGTTGAAAAGGCC
## hsa   GTCGAGCCAGCACCTGTTTCTGGACCTGCCTAAGCTGGAGAAGCGACTGGAGGAGTGGTTGGGGAGGACA
##       ^          *    ** **    * *  *^   *^*   ^ *^                          
##    1401        .         .         .         .         .         .         1470 
## 
##    1471        .         .         .         .         .         .         1540 
## ref   CTGGAAGGCAGCAACT-TCCGCAAGCCGTCCAACCTGTT---TGTTCATGGCTATGTGACGGT---GAAC
## sce   TCTGAAGAAGGTAACTGGTCAAAAAATTCAAAAACAATTACGCAATCATGGTTGAAGGATGGTTTGAAGC
## hsa   TTGCCTGGCAGTGACTGGACACCCAATGCCCAGTTTATCACCCGTTCTTGGCTTCGGGATGGCCTCAAGC
##             *^ ^* ^***   *^   ^      *^   ^*     ^ ** *** *  ^ ** **    ^*^* 
##    1471        .         .         .         .         .         .         1540 
## 
##    1541        .         .         .         .         .         .         1610 
## ref   GGCGC---------AAAGATGTCCAA----GTCTCGCGGCACCTTTA-------TTAAAGCCAGCACCTG
## sce   CACGTTGTATTACAAGAGATTTAGTTTGGGGTACGCCAGTGCCTTTAGAAAAATATAAAGACAAAGTCTT
## hsa   CACGCTGCATAACCCGAGACCTCAAATGGGGAACCCCTGTACCCTTAGAAGGTTTTGAAGACAAGGTATT
##        ^**           ^***  *        *     * * ^** ***        *^*** **^ ^  *  
##    1541        .         .         .         .         .         .         1610 
## 
##    1611        .         .         .         .         .         .         1680 
## ref   GCTGAATCATTTTGACGCAG--ACAGCCTGCGTTACTACTACACTGCGAAACTCTCTTCGCGCATTGATG
## sce   GTACGTTTGGTTTGACGCTACAATCGGCTACGTTTCCAT--CACTTCCAA-----CTACACCAAAGAATG
## hsa   CTATGTCTGGTTTGATGCCACTATTGGCTATCTGTCCAT--CACAGCCAA-----CTACACAGACCAGTG
##           ^   ^ ***** ** ^  *  * **^  *  * *   ***  * **     ** *^*  *  ^^** 
##    1611        .         .         .         .         .         .         1680 
## 
##    1681        .         .         .         .         .         .         1750 
## ref   ATATCGATCTCAACCTGGAAGATTTCGTTCAGCGTGTGAATGCCGATATCG--TTAACAAAGTGGTTAAC
## sce   GAAACAATGG-----TGGAATA----ATCCAGAGCATGTTTCATTGTATCAATTCATGGGTAAGGACAAT
## hsa   GGAGAGATGG-----TGGAAGA----ACCCAGAGCAAGTGGACCTGTATCAGTTCATGGCCAAAGACAAT
##       ^ *  ^**       ***** *    ^  *** * ^ *       ^****^  * *  ^  ^ ^*  **  
##    1681        .         .         .         .         .         .         1750 
## 
##    1751        .         .         .         .         .         .         1820 
## ref   CTGGCCTCCCGTAATGCGGGCTTTATCAACAAGCGTTTTGACGGCGTGCTGGCAAGCGAACTG-------
## sce   GTTCCTTTCCATACAGTTGTTTTCCCTGGT-----TCTCAATTGGGTACGG--AAGAGAACTGGACTATG
## hsa   GTTCCTTTCCATAGCTTAGTCTTTCCTTGC-----TCAGCCCTAGGAGCTG--AGGATAACTATACCTTG
##        *  * * **^**     *  **     ^      *       ^ * ^* *  *^*  ****^        
##    1751        .         .         .         .         .         .         1820 
## 
##    1821        .         .         .         .         .         .         1890 
## ref   ----GCTGACCCGCAGTTGTACAAAACCTTCACTGATGCCGCTGAAGTGATTGGTGAAGCGTGGGAAAGC
## sce   TTGCACCATTTGAATACTACAGAATACTTACAAT----------ATGAGAACGGTAAATTTTCTAAAAGT
## hsa   GTCAGCCACCTCATTGCTACAGAGTACCTGAACT----------ATGAGGATGGGAAATTCTCTAAGAGC
##           ^* ^    ^  ^ *^ * *^ ** *  * *          * * *^  ** ^**   *  ^*^**  
##    1821        .         .         .         .         .         .         1890 
## 
##    1891        .         .         .         .         .         .         1960 
## ref   CGTGA---------ATTTGGTAAAGCCGTGCGCGAAATCATGGCGCTGGCTG--ATCTGG-----CTAAC
## sce   AGGGGTGTTGGTGTTTTTGGTAATAACGCTCAAGACTCTGGAATTTCTCCAAGTGTTTGGAGATACTACC
## hsa   CGCGGTGTGGGAGTGTTTGGGGACATGGCCCAGGACACGGGGATCCCTGCTGACATCTGGCGCTTCTATC
##        * *^          ***** ^* ^  *  *^ **    ^ ^^      * ^  ^* ***     *** * 
##    1891        .         .         .         .         .         .         1960 
## 
##    1961        .         .         .         .         .         .         2030 
## ref   CGCTATGTCGATGAACAGG------------------CTCCGTGGGTG-----GTGGCGAAACAGGAAGG
## sce   TGGCATCTGTTAGACCAGAATCTAGTGATTCTCATTTCTCATGGGATGACTTTGTTGCTAGA-AACAACA
## hsa   TGCTGTACATTCGGCCTGAGGGCCAGGACAGTGCTTTCTCCT-GGACGGACCTGCTGCTGAAGAATAATT
##        *  ^*      *^ * *^                  ***   **^ *     *  ** ^^* *^ **   
##    1961        .         .         .         .         .         .         2030 
## 
##    2031        .         .         .         .         .         .         2100 
## ref   CCGCGATGCCGACCTGC--AGGCAATTTGCTCAATGGGCATCAACCTGTTCCGC----------------
## sce   GTGAATTGTTGGCTAACTTGGGTAACTTTGTTAACAGA--TTAATTAAGTTTGT----------------
## hsa   CTGAGCTGCTTAACAACCTGGGCAACTTCATCAACAGAGCTGGGATGTTTGTGTCTAAGTTCTTTGGGGG
##         * ^ **   ^   ^*  ^** ** **  * ** ^*^  * ^^     *  *                  
##    2031        .         .         .         .         .         .         2100 
## 
##    2101        .         .         .         .         .         .         2170 
## ref   ----------------GTGCTGATGACTTACCTGAAGCCGGTACTGCCGAAACTGACCGAGCG--TGCAG
## sce   -----------------------------------------TAATGCCAAATATAATGGTGTTGTTCCAA
## hsa   CTATGTGCCTGAGATGGTGCTCACCCCTGATGATCAGCGCCTGCTGGCCCATGTCACCCTGGAGCTCCAG
##                                                *^ ** *  *  * *    *    * **^ 
##    2101        .         .         .         .         .         .         2170 
## 
##    2171        .         .         .         .         .         .         2240 
## ref   AAGCAT-------TCCTCAATACGGAACTGACCTGGGATGG------------TATCCAGCAACCGCTGC
## sce   AATTCG-------ACCCCAAGAAGGTTTCCAATTATGATGGTTTAGTTAAAGATATCAACGAAATTTTAT
## hsa   CACTATCACCAGCTACTTGAGAAGGTTCGGATCCGGGATGCCTTGCGCAGTATCCTCACCATATCTCGAC
##        *             *  ^* * **     *   ^ ****               **     *     ^  
##    2171        .         .         .         .         .         .         2240 
## 
##    2241        .         .         .         .         .         .         2310 
## ref   TGGGCCACAAAGTGAATCCGTTCAAGGCGCTGTATAACCGCA---------TCGATATGAGGCAGGTTG-
## sce   -------CAAATTACGTCAAGGAAATGGAACTTGGACATGAAAGACGTGGTCTAGAAATTGCCATGTCGT
## hsa   ATGGCAACCAATATATTCAGGTGAATGAGCCCTGGAAGCGGA---------TTAAAGGCAGTGAGGCTGA
##              * **     ** ^   ** * ^   *^ *   * *           ^^ ^   *  * *  *  
##    2241        .         .         .         .         .         .         2310 
## 
##    2311        .         .         .         .         .         .         2380 
## ref   -AAGCACTGGTGGAAGCC----TCTAAAGAAGAAGTAAAAGCCGCTGCCGCGCC---GGTAAC-------
## sce   TAAGTGCTCGTGGTAACCAGTTTTT------GCAAGAAAATAAGTTG----------GACAATACCTTGT
## hsa   CAGGCAACGGGCAGGAACAGTGACTGGCTTGGCAGTGAATATAGCTGCCTTGCTCTCTGTCATGCTTCAG
##        *^* ^   *  ^ ^^ *      *      * *^ ^**    * **           ^  *         
##    2311        .         .         .         .         .         .         2380 
## 
##    2381        .         .         .         .         .         .         2450 
## ref   -----TGGCCCGCTGGCAGATGATCCGATTCAG--------GAAACCATCACCTTTG---------ACGA
## sce   TTTCACAGTCCCCAGAAAAGT---------CAG---------------------------------ATGC
## hsa   CCTTACATGCCCACGGTTAGTGCCACAATCCAGGCCCAGCTGCAGCTCCCACCTCCAGCCTGCAGTATCC
##             ^  **   *^  ^^*         ***                                 *    
##    2381        .         .         .         .         .         .         2450 
## 
##    2451        .         .         .         .         .         .         2520 
## ref   CTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAAC-------GCAGAGTTTGTTGAAGGTTC---
## sce   TGTTGTCGCAGTTGGTTTGAATATT------------------ATTTACGCTGTTAGCTCTATTATC---
## hsa   TGCTGACAAACTT--CCTGTGTACCTTACCAGCAGGACACCAGATTGGCACAGTCAGTCCCTTGTTCCAA
##           *  ^ * **    ** ^ ^                        ^*^  **  *        **    
##    2451        .         .         .         .         .         .         2520 
## 
##    2521        .         .         .         .         .         .         2590 
## ref   -----------TGACAAACTGCTGCGCCTGACGCTGGATCTCGGCGGTGAAAAACGCAATGTCTTCTCCG
## sce   -----------ACACCATAT----------ATGCCAGAAATAGGTGAGAAAATAAACAAGA---------
## hsa   AAATTGGAAAATGACCAGATTGAAAGTTTAAGGCAGCGCTTTGGAGGGG-GCCAGGCAAAAACGTCCCCG
##                    ** *  *          * ** ^ ^  * ** *^ ^ ^  * ^*** ^          
##    2521        .         .         .         .         .         .         2590 
## 
##    2591        .         .         .         .         .         .         2660 
## ref   G-------------------TATTCGTTCTGCTTACCCGGATCCG---CAGGCACTGATTGGT----CGT
## sce   --------------------TGTTAAAT----------GCACCAGCTTTAAAAATTGA---------TGA
## hsa   AAGCCAGCAGTTGTAGAGACTGTTACAACAGCCAAGCCACAGCAGATACAAGCGCTGATGGATGAAGTGA
##                           *^**              ^ * * *    *^^ ^ ***          *  
##    2591        .         .         .         .         .         .         2660 
## 
##    2661        .         .         .         .         .         .         2730 
## ref   CACACC-----ATTATGGTGGCTAACCTGGCACCACGTAAAATGCGCTTCGGTATCTCTGAAGGCATGGT
## sce   TAGATT------CCATT-TGGCAATCCTAGAAGGACATAATATAAAC-------------AAGGCAGAAT
## hsa   CAAAACAAGGAAACATTGTCCGAGAACTGAAAGCACAAAAGGCAGAC-------------AAG--AACGA
##        * *          **  *    ^  **^^ *  **^ ** ^ ^ ^*             ***  *  ^  
##    2661        .         .         .         .         .         .         2730 
## 
##    2731        .         .         .         .         .         .         2800 
## ref   GATGGCTGC-----------CGGTCCTGGCGGGAAAGATA-----TTTTCCTGCTAAGCCCGGA-----T
## sce   ACTTGTTCC-----------AACGTATTGATGAAAAGAAA---------ATCGATGAATGGAGA------
## hsa   GGTTGCTGCGGAGGTGGCGAAACTCTTGGATCTAAAGAAACAGTTGGCTGTAGCTGAGGGGAAACCCCCT
##       ^ * * * *            ^    * *    ***** *            * *^*^   ^^*       
##    2731        .         .         .         .         .         .         2800 
## 
##    2801        .         .         .  2833 
## ref   GCCGGTGCTAAACCGGGTCATCAGGTGAAATAA
## sce   ------GCCAAATATGGTGGTCAACAAGTGTAA
## hsa   GAAGCCCCTAAA---GGCAAGAAGAAAAAGTAA
##              * ***   **  ^  *^  ^^ ^*** 
##    2801        .         .         .  2833 
## 
## Call:
##   bio3d::seqaln(aln = sequences, id = id <- id, exefile = "muscle", 
##     outfile = paste(gsub(":", "_", target), "aln.fa", sep = "_"), 
##     protein = protein)
## 
## Class:
##   fasta
## 
## Alignment dimensions:
##   3 sequence rows; 2833 position columns (1723 non-gap, 1110 gap) 
## 
## + attr: id, ali, call